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Pathbase Accession Number Search
Accession Number:
Numeric field.
Examples:
34
All other fields are ignored when you enter something in this field.
Advanced Search
Controlled Vocabulary
Mouse
Rat
Other
Organism
Female
Male
Other
Unknown
Sex
Hemizygous
Heterozygous
Homozygous
Mosaic
Mosaic/chimera
Transplantation
Wild-type
Genotype Status
Genotype Status:
Alphabetical field.
Select genotype status. Use of the controlled vocabulary will return better results.
Multiple entries can be selected by holding CTRL or SHIFT
If you enter more than one term, they are searched with a boolean AND.
Examples:
Mosaic|Homozygous
Chemical-mutagenesis
Chimera
Chimera-knockout
Chimera-overexpression
Conditional-knockout
Dominant negative
Gene-knockout-deletion
Gene-knockout-mutation
Gene-trap
Hypomorph
Insertion/Knock-in
Mutagenesis
None
Radiation-mutagenesis
Spontaneous background
Spontaneous-mutant
Transgenic
Transgenic-Ectopic-expression
Transgenic-Ectopic-overexpression
Transgenic-Overexpression
Viral-mutagenesis
Genetic Manipulation
Genetic Manipulation:
Alphabetical field.
Select genetic manipulation. Use of the controlled vocabulary will return better results.
Multiple entries can be selected by holding CTRL or SHIFT
If you enter more than one term, they are searched with a boolean AND.
Examples:
Chimera|Gene-trap
Chemical
Cross with other mutant/transgenic
Other pathogen
Radiation
Viral
Experimental Manipulation
Experimental Manipulation:
Alphabetical field.
Select experimental manipulation. Use of the controlled vocabulary will return better results.
Multiple entries can be selected by holding CTRL or SHIFT
If you enter more than one term, they are searched with a boolean AND.
Examples:
Viral|Radiation
Ontologies
MA
MA Ontology:
Alpha-numerical field.
Enter either MA number, anatomical site or use the ontology (recommended).
Examples:
27
lower back
27:lower back
MPATH
MPATH Ontology:
Alpha-numerical field.
Enter either MPATH number, pathology or use the ontology (recommended).
Multiple entries can be separated by |
Examples:
4
necrosis
3:apoptosis|4:necrosis
CL
Cell:
Alpha-numerical field.
Enter CL number, cell type or use the ontology (recommended).
Multiple entries can be separated by |
If you enter more than one term, they are searched with a boolean AND.
Examples:
139
cell_in_vivo
139:amelocyte|3:cell_in_vivo
'Numerical field.
EMAP
Age:
Alpha-numerical field.
Enter either EMAP number, age or use the ontology (recommended).
Example:
12
TS4,embryo
12:TS4,embryo
Free text
Gene Ontology:
Numerical field.
Enter GO number.
Multiple entries can be separated by |
If you enter more than one term, they are searched with a boolean AND.
Example:
234|567
Designated Allele Name:
Alpha-numerical field.
Enter designated allele name. It is recommended to use the controlled vocabulary.
Multiple entries can be separated by |
If you enter more than one term, they are searched with a boolean AND.
Example:
igf2|igf3
Mouse Phenome Database Number:
Numerical field.
Enter MPD number.
Multiple entries can be separated by |
If you enter more than one term, they are searched with a boolean AND.
Example:
234|56
PubMed:
Numerical field.
Enter MedLine Identifier.
Multiple entries can be separated by |
If you enter more than one term, they are searched with a boolean AND.
Example:
234|56
Gene:
Alpha-numerical field.
Enter gene.
Multiple entries can be separated by |
If you enter more than one term, they are searched with a boolean AND.
Example:
igf2|igf3
Strain:
Enter strain.
Cross: capital X
Superscript: < >
Example:
B6.Cg-Kit < W-44 > JGpi1(a)
Magnification:
Alpha-numerical field.
Free text
Stain:
Alpha-numerical field.
Free text
Description:
Alpha-numerical field.
Free text
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